Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs11268723 chr4:57191078 GTCATGGATATCCAAC/G 0.000129 171 28.03 22.08 18.57 KM Plot
UCEC rs112874055 chr14:73542482 T/C 4.68E-7 173 22.57 22.63 10.33 KM Plot
UCEC rs112946203 chr14:73535533 C/T 4.61E-7 174 22.57 27.05 10.33 KM Plot
UCEC rs112994691 chr7:64177992 G/A 0 174 22.57 21.98 2.4 KM Plot
UCEC rs113063968 chr14:73593819 T/G 4.47E-7 173 22.57 22.63 10.33 KM Plot
UCEC rs113202172 chr14:73505403 A/G 4.61E-7 174 22.57 27.05 10.33 KM Plot
UCEC rs113207139 chr5:54371028 T/TA 3.87E-7 174 21.1 27.53 20.33 KM Plot
UCEC rs113269183 chr16:30847467 T/C 6.93E-9 168 23.23 17.4 4.5 KM Plot
UCEC rs113270740 chr16:30843117 G/A 1.02E-8 169 22.85 19.5 4.5 KM Plot
UCEC rs113446432 chr19:311138 C/A 2.78E-6 168 24.02 19.1 8.3 KM Plot
UCEC rs113463111 chr5:54386854 G/A 0.00011 173 21.07 25.8 18.47 KM Plot
UCEC rs113537081 chr2:98302136 C/T 1.11E-16 172 26.27 18.67 2.03 KM Plot
UCEC rs113566031 chr2:74089028 A/G 6.39E-5 169 22.75 21.35 18.47 KM Plot
UCEC rs11361465 chr8:66560041 CA/C 2.82E-11 166 4.33 22.57 22.6 KM Plot
UCEC rs113638118 chr14:73375404 G/A 4.8E-7 174 22.8 20.98 10.33 KM Plot